Publications & Demos

Semantic Technologies Group (Data Mining) - Publications & Demos

Kanagasabai R., Choo K. H. Ranganathan S. and Baker C. J. O. (2007)
A workflow for mutation extraction and structure annotation
Journal of Bioinformatics and Computational Biology Vol 5 No 6:
Mutation Demo
Mutation Demo with mutation impact and protein property (FULL)
Mutation Demo with mutation impact and protein property (PART 1 - KnowleGator)
Mutation Demo with mutation impact and protein property (PART 2 - mSTRAPviz)

Baker C. J. O., Kanagasabai R., Ang W. T., Veeramani A., Low H-S, Wenk M. R. (2008)
Towards ontology-driven navigation of the lipid bibliosphere
BMC Bioinformatics 2008, 9 (Suppl 1):S5
Lipid Demo - Find literature supporting the involvement of the lipid ‘paclitaxel’ in disease

Kanagasabai R., Low HS, Ang WT, Wenk MR, and Baker CJO,
Ontology-Centric navigation of pathway information mined from text
The 11th Annual Bio-Ontologies Meeting, co-located with ISMB 2008, Toronto Canada, July 20th 2008
Lipid Protein Pathway Demo
Apoptosis Pathway Demo

Rajapakse M., Kanagasabai R., Ang W.T., Veeramani A., Schreiber, M.J., Baker C. J. O. (2008)
Ontology-centric knowledge integration and navigation of the Dengue literature.
Journal of Biomedical Informatics - Accepted
Dengue Epidemic Demo

Alexander Garcia, Zhuo Zhang, Menaka Rajapakse, Christopher J. O. Baker and Suisheng Tang
Capturing and Modeling Neuro-radiological Knowledge on a Community Basis, the Head Injury Scenario
Semantic Web for Healthcare and Life Sciences Workshop, Co-located with 17th International World Wide Web Conference, April 22-25, Beijing, China, (2008).
Head Injury Demo 1
Head Injury Demo 2

Expert Finding
Find a Person A in company B who knows someone in Company C with expertise in D + was inventor of Patent E

BBC News Video Clips
News Video Indexing Demo 1 (Media KnowleFinder Alpha)
News Video Indexing Demo 2 (KnowleGator)

Business Intelligence – Chemical Products
BI-Demo - Search for chemical constituents in retail products sold by Evonik
BI-Demo - Search for companies in Europe that sell products which contain Polyeurathane
KnowleGator - KnowleCrawler demo (New! - 06 October 2008)

EST2 Workflow (New! - 06 October 2008)
EST2 - Workflow demo

Law & Crimes (New! - 20 November 2008)
1. KnowLuator screenshot of the Law ontology
2. What question does the keyword 'crime' generates?
- Screenshot 1(search)
- Screenshot 2 (results)
3. Which person commits a crime that warrants a conviction? - KnowleGator vs KnowleFinder
4 . Medical condition (kleptomania) & stealing demo with KnowleFinder
5. Simple analytics
- Crimes and age group involvement
- Certain medical conditions associated with certain crimes
- Companies that always produce criminals
6 . Complex KnowleGator query screenshot